The discovery and exploitation of gold in Antioquia and Chocó presented some difficulties for the Santa Fe mint, given the distances involved. Thus, in 1712, the Crown sent the New Kingdom of Granada a royal decree that consulted the need and convenience of establishing a new mint, this time in Popayán. By Royal Decree dated June 29, 1729, the city council was authorised to found a Mint (Casa de Moneda) on the condition that it was built and operated at the expense of the benefited city, but this could not be carried out due to a lack of funds. Shortly afterwards, Martín de Arranchea, a resident of the city, requested this permission, promising to assume all the expenses. However, it was blocked by José Prieto Salazar, treasurer of the Santa Fe mint, arguing that he had received authorisation from the king to establish one or more mints in the New Kingdom.
Prieto's attitude did not allow the mint to be established in Popayán until 1749, when the king responded to an offer made by Pedro Agustín de Valencia. By Royal Decree of 15 August, he was granted authorisation to establish the Mint (Casa de Moneda), appointing him Treasurer and with the power to choose the first accountant, cutter, and balance judge. When Valencia had almost completed the building, José Prieto's widow objected to Valencia's appointment on the grounds that the permission granted to her late husband was a privilege that belonged to her family. The viceroy, concerned that he was in breach of royal regulations, ordered Valencia in May 1752 to suspend the work.
However, Valencia had not been satisfied with the closure ordered by the viceroy and had appealed to the court, which responded with a new Royal Decree dated 27 November 1756 reiterating the desire and royal authorisation for the mint to be established in Popayán. Little more than a year later, the Popayán Mint (Casa de Moneda) was completed and ready for production. It was equipped from the outset with mills for the minting of coins by handwheel. On the 8th of February 1758 the first coin was minted, which was a piece of two escudos; the first ounce on the 6th of April; on the 8th the half ounce and finally, on the 24th, an escudo.
By Royal Decree of Charles III on 16 November 1761, the Mint (Casa de Moneda) was ordered to close due to the damage it was causing to the Royal Treasury. Finally, in response to the demand from Quito, which was being supplied by the mint, the King ordered its reopening by Royal Decree on 23 August 1766. It was officially opened in February 1767.
By Royal Decree of 12 September 1770, the Mint (Casa de Moneda) was incorporated into the Crown. Pedro Agustín de Valencia was once again appointed treasurer and obtained the title of Count of Casa-Valencia.
During the emancipation of the American colonies (1810-1816), the patriots occupied Popayán several times until it was finally reconquered by General Juan Samano on 13 May 1816. Despite this, the mint continued to always mint coins with Ferdinand VII’s mintmarks. In 1813 the patriots minted emergency coins of 1/2, 2 and 8 copper reales, without naming the king in their legend, but with the name of the royalist country ''Nuevo Reyno de Granada'' (New Kingdom of Granada).
The Popayán Mint (Casa de Moneda) was in the hands of the royalist government of the Crown until the independence of Popayán on July 14, 1820, when the patriot leader General Manuel Valdés made his triumphal entry. Marshal Juan de la Cruz Mourgeon, appointed president of the Royal Court of Quito, assembled an army of 800 men for the recovery of New Granada and landed at Atacames, in what is now the Ecuadorian province of Esmeraldas, on 28 November 1821, and headed for Quito, where he made his entry on 24 December. On 26 December he ordered the transfer of the machinery and tools of the Mint to Quito, with the intention of preventing them from falling into the hands of the insurgents. José María Satisával, director of the Mint (Casa de Moneda), was at that time in Pasto, directing the evacuation of the Mint (Casa de Moneda) to that city. As he reported to Mourgeon on 1 January 1822, the equipment had already left Popayán, including the small flywheel for making small change. The large flywheel and the milling machines, due to their great weight and difficulty of transport, were left at the Mint (Casa de Moneda). On 15th January the director was ordered to go to Pasto, where he apparently arrived on 22nd January.
The Popayán mint was closed, dismantled and completely inactive, until Francisco de Paula Santander reactivated it on 22 July 1822. He began to mint coins with the new dies for making dies, which had been delivered to him in September 1822. Finally, in 1908, it was converted into a military regimental accommodation building.